Publications

  • Buratin A, Gaffo A, Dal Molin A, Bortoluzzi S. CircIMPACT: An R Package to Explore Circular RNA Impact on Gene Expression and Pathways. GENES 2021, 12(7), 1044.

  • Gaffo E, Buratin A, Dal Molin A, Bortoluzzi S. Bioinformatic Analysis of Circular RNA Expression. METHODS MOL BIOL. 2021;2348:343-370.

  • Agnelli L, Bortoluzzi S., Pruneri G. Bioinformatic Pipelines to Analyze lncRNAs RNAseq Data. METHODS MOL BIOL. 2021;2348:55-69.

  • Maura F, Agnelli L, Bortoluzzi S. Genomics of Lymphoproliferative Disease. FRONT ONCOL. 2021 Mar 17;11:660016.

  • Boldrin E, Gaffo E, Niedermayer A, Boer JM, Zimmermann M, Weichenhan D, Claus R, Münch V, Sun Q, Enzenmüller S, Seyfried F, Demir S, Zinngrebe J, Cario G, Schrappe M, Den Boer ML, Plass C, Debatin KM, te Kronnie G, Bortoluzzi S*, Meyer LH MicroRNA-497/195 is tumor-suppressive and cooperates with CDKN2A/B in pediatric acute lymphoblastic leukemia. BLOOD 2021 Jun 7:blood.2020007591. *Co-last Author

  • Giussani E, Binatti A, Calabretto G, Gasparini VR, Teramo A, Vicenzetto C, Barilà G, Facco M, Coppe A, Semenzato G, Bortoluzzi S*, Zambello R. Lack of Viral Load Within Chronic Lymphoproliferative Disorder of Natural Killer Cells: What Is Outside the Leukemic Clone? FRONT ONCOL. 2021 Jan 18;10:613570. *Co -last Author

  • Lovisa F, Garbin A, Crotti S, Di Battista P, Gallingani I, Damanti C, Tosato A, Carraro E, Pillon M, Mafakheri E, Romanato F, Gaffo E, Biffi A, Bortoluzzi S, Agostini M, Mussolin L. Increased Tenascin C, osteopontin and Hsp90 levels in plasmatic exosomes of pediatric ALK-positive anaplastic large cell lymphoma: new diagnostic opportunity DIAGNOSTICS 2021 11 (2), 253.

  • Damanti C, Gaffo E, Lovisa F, Garbin A, Di Battista P, Gallingani I, Tosato A, Pillon M, Carraro E, Mascarin M, Elia C, Biffi A, Bortoluzzi S.*, Mussolin L. Reference microRNAs to normalize small RNA qRT-PCR levels in plasmatic exosomes of pediatric hematologic malignancies. CELLS. 2021 Jan 8;10(1):101. *Corresponding and co-last Author

  • Dal Molin A, Hofmans M, Gaffo E, Buratin A, Cavé H, Flotho C, de Haas V, Niemeyer CM, Stary J, Van Vlierberghe P, Philippé J, De Moerloose B, te Kronnie G, Bresolin S, Lammens T, Bortoluzzi S. Dysregulation of circRNAs and novel disease networks in Juvenile Myelomonocytic Leukemia. FRONT. CELL DEV. BIOL. 2021 Jan 6;8:613540.

​

  • Buratin A, Paganin M, Gaffo E, Dal Molin A, Roels J, Germano G, Siddi MT, Serafin V, De Decker M, Gachet S, Durinck K, Speleman F, Taghon T, Te Kronnie G, Van Vlierberghe P, Bortoluzzi S. Large-scale circular RNA deregulation in T-ALL: unlocking unique ectopic expression of molecular subtypes. BLOOD ADV. 2020 Dec 8;4(23):5902-5914.

  • Marzollo A, Maestrini G, La Starza R, Elia L, Malfona F, Pierini T, Tretti Parenzan C, Coppe A, Bortoluzzi S, Biffi A, Mecucci C, Bresolin S, Testi AM. A novel germline variant in PIK3R1 results in SHORT syndrome associated with TAL/LMO T-cell acute lymphoblastic leukemia. AM J HEMATOL. 2020 Dec;95(12):E335-E338.

  • Binatti A, Bresolin S, Bortoluzzi S, Coppe A. iWhale: a computational pipeline based on Docker and SCons for detection and annotation of somatic variants in cancer WES data. BRIEF BIOINFORM. 2020 May 20:bbaa065.

  • Gasparini VR, Binatti A, Coppe A, Teramo A, Vicenzetto C, Calabretto G, Barilà G, Barizza A, Giussani E, Facco M, Mustjoki S, Semenzato G, Zambello R, Bortoluzzi S. A high definition picture of somatic mutations in chronic lymphoproliferative disorder of natural killer cells. BLOOD CANCER J. 2020 Apr 22;10(4):42. doi: 10.1038/s41408-020-0309-2

  • Lovisa F, Di Battista P, Gaffo E, Damanti CC, Garbin A, Gallingani I, Carraro E, Pillon M, Biffi A, Bortoluzzi S*, Mussolin L. RNY4 in Circulating Exosomes of Patients With Pediatric Anaplastic Large Cell Lymphoma: An Active Player? FRONT ONCOL. 2020 Feb 27;10:238. doi: 10.3389/fonc.2020.00238.

  • Gaffo E, Bortolomeazzi M, Bisognin A, Di Battista P, Lovisa F, Mussolin L, Bortoluzzi S. MiR&moRe2: A Bioinformatics Tool to Characterize microRNAs and microRNA-Offset RNAs from Small RNA-Seq Data. INT J MOL SCI. 2020 Mar 4;21(5):1754. doi: 10.3390/ijms21051754.

​

  • Gaffo E, Boldrin E, Dal Molin A, Bresolin S, Bonizzato A, Trentin L, Frasson C, Debatin K-M, Meyer L, te Kronnie G, Bortoluzzi S. Circular RNA differential expression in blood cell populations and exploration of circRNA deregulation in pediatric acute lymphoblastic leukemia. SCIENTIFIC REPORTS. 2019 9: 14670. doi: 10.1038/s41598-019-50864-z.

  • Lovisa F, Binatti A, Coppe A, Primerano S, Carraro E, Pillon M, Pizzi M, Guzzardo V, Buffardi S, Porta F, Farruggia P, De Santis R, Bulian P, Basso G, Lazzari E, d'Amore ESG, Bortoluzzi S, Mussolin L. A high definition picture of key genes and pathways mutated in pediatric follicular lymphoma. HAEMATOLOGICA. 2019 Feb 28. pii: haematol.2018.211631. doi: 10.3324/haematol.2018.211631. *Co-last author.

  • Dal Molin A, Bresolin S, Gaffo E, Tretti C, Boldrin E, Meyer LH, Guglielmelli P, Vannucchi AM, Te Kronnie G, Bortoluzzi S. CircRNAs Are Here to Stay: A Perspective on the MLL Recombinome. FRONT GENET. 2019 Feb 13;10:88. doi:10.3389/fgene.2019.00088.

  • Perilli L, Tessarollo S, Albertoni L, Curtarello M, Pastò A, Brunetti E, Fassan M, Rugge M, Indraccolo S, Amadori A, Bortoluzzi S, Zanovello P. Silencing of miR-182 is associated with modulation of tumorigenesis through apoptosis induction in an experimental model of colorectal cancer. BMC CANCER 2019 Aug; 19: 821. doi: 10.1186/s12885-019-5982-9.

  • Agnelli L, Bisognin A, Todoerti K, Manzoni M, Taiana E, Galletti S, Cutrona G, Gaffo E, Bortoluzzi S, Neri A. Expanding the repertoire of miRNAs and miRNA-offset RNAs expressed in multiple myeloma by small RNA deep sequencing. BLOOD CANCER J. 2019 Feb 19;9(3):21. doi: 10.1038/s41408-019-0184-x.

​

​

​

​

​

​

​

​

​

​