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Name: ruditapes2_c481

Description: chaperonin containing subunit 2

>ruditapes2_c481
ACATGTAGAAAAAAAATCTAATGAAATAAATATTGATCAAAATTAAAGGTACATGACGCA
AAATGGAACCATAATGTTTTACTTGCACACATCACAGTTTTAACATATAAAGACGTTAAT
GTCCTAAAGGATAATTGTAATTTTTGAGATAAATCCTAATAATTTCCTTGTTATAAGTTT
TCTATTTGCTTTAATCCTTCTATCATAGCACTTAAAGTTTCCAATAGCAAATTTGTTCAG
TGCATTTTTACAATAATTTAACACATATAGTACAAAAGCCGTAACTTCCTTCTTCATTGT
CAGAAATTCTGACTAATAAACCTGGTGGAGTATGTTAATGTTACACGCAGACAATTAATA
GAGCAGAACTTATATAATTTAATAGTCTATCAATGATCTCTCATATCTGGATTTCTCTGT
CGAGGTGCCGCTTTCACGATGTCGTCAACACGGAGAATCATCTCTGCAGCTTCTGAGGCA
CTGAGTAACACTTGACGTTTTACTTGGAAAGATTCTGTAATGCCTAATTTCTCCAT

Assembly

hideshow Get all reads as txt Get contigs plus reads as txt

Gene Ontology

Molecular Function
GO:0005524 ATP binding
GO:0004672 protein kinase activity
GO:0051082 unfolded protein binding
Biological Process
GO:0006468 protein amino acid phosphorylation
GO:0006457 protein folding
Cellular Component
GO:0005832 chaperonin-containing T-complex
GO:0005634 nucleus

Blast Descriptions

BLAST alignments with nr database

gi|47210712|emb|CAF90004.1| unnamed protein product [Tetraodon nigroviridis] 76 1.32102e-12
gi|198432709|ref|XP_002131299.1| PREDICTED: similar to Chaperonin containing TCP1, subunit 2 ... 75 1.72531e-12
gi|224094031|ref|XP_002190936.1| PREDICTED: putative chaperonin containing TCP1 subunit 2 (be... 75 2.25332e-12
gi|60302718|ref|NP_001012551.1| chaperonin containing TCP1, subunit 2 (beta) [Gallus gallus]... 75 2.25332e-12
gi|148232533|ref|NP_001080388.1| chaperonin subunit 2 (beta) [Xenopus laevis] >gi|27503862|gb... 75 2.94293e-12
gi|60393040|gb|AAX19463.1| TCP1-beta [Notothenia coriiceps] 74 3.84358e-12
gi|114051313|ref|NP_001040109.1| chaperonin containing t-complex polypeptide 1 beta subunit [... 73 8.5626e-12
gi|260797797|ref|XP_002593888.1| hypothetical protein BRAFLDRAFT_279056 [Branchiostoma florid... 72 1.46056e-11
gi|213511170|ref|NP_001133605.1| T-complex protein 1 subunit beta [Salmo salar] >gi|209154654... 72 1.46056e-11
gi|189518398|ref|XP_001918886.1| PREDICTED: hypothetical protein [Danio rerio] 72 1.46056e-11
gi|157423537|gb|AAI53469.1| Cct2 protein [Danio rerio] 72 1.46056e-11
gi|42627881|ref|NP_958863.1| chaperonin containing TCP1, subunit 2 (beta) [Danio rerio] >... 72 1.46056e-11
gi|55741976|ref|NP_001006757.1| chaperonin containing TCP1, subunit 2 (beta) [Xenopus (Silur... 72 1.46056e-11
gi|156551988|ref|XP_001602878.1| PREDICTED: similar to ENSANGP00000004677 [Nasonia vitripenni... 72 1.90755e-11
gi|126339411|ref|XP_001369473.1| PREDICTED: similar to chaperonin containing t-complex polype... 72 2.49134e-11
gi|170046898|ref|XP_001850982.1| thermosome subunit alpha [Culex quinquefasciatus] >gi|167869... 71 3.25379e-11
gi|149632291|ref|XP_001511892.1| PREDICTED: similar to Chaperonin containing TCP1, subunit 2 ... 71 4.24958e-11
gi|118429555|gb|ABK91825.1| chaperonin-containing TCP1 subunit 2 [Artemia franciscana] 71 4.24958e-11
gi|77735435|ref|NP_001029411.1| chaperonin containing TCP1, subunit 2 (beta) [Bos taurus] >g... 71 4.24958e-11
gi|67772093|gb|AAY79299.1| chaperonin subunit 2 [Siniperca chuatsi] 71 4.24958e-11

Blast Alignments

                
                    gi|47210712|emb|CAF90004.1| unnamed protein product [Tetraodon nigroviridis]  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M +LGITESFQVKRQVLLSASEAAEMILRVDD++KAAPR+R PD 
                            MAELGITESFQVKRQVLLSASEAAEMILRVDDVIKAAPRKRVPD 530
                        
                
                    gi|198432709|ref|XP_002131299.1| PREDICTED: similar to Chaperonin containing TCP1, subunit 2 ...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M+KLGITESFQVKRQVL+SA+EAAEMI+RVD+I+K+APRQR PD 
                            MQKLGITESFQVKRQVLVSAAEAAEMIIRVDNIIKSAPRQRQPD 534
                        
                
                    gi|224094031|ref|XP_002190936.1| PREDICTED: putative chaperonin containing TCP1 subunit 2 (be...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPDMR 445
                            M  LG+TESFQVKRQVLLSA+EAAEMILRVDDI+KAAPR+R PD R 
                            MSVLGVTESFQVKRQVLLSAAEAAEMILRVDDIIKAAPRKRVPDHR 534
                        
                
                    gi|60302718|ref|NP_001012551.1| chaperonin containing TCP1, subunit 2 (beta) [Gallus gallus]...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPDMR 445
                            M  LG+TESFQVKRQVLLSA+EAAEMILRVDDI+KAAPR+R PD R 
                            MAALGVTESFQVKRQVLLSAAEAAEMILRVDDIIKAAPRKRVPDHR 534
                        
                
                    gi|148232533|ref|NP_001080388.1| chaperonin subunit 2 (beta) [Xenopus laevis] >gi|27503862|gb...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M +LGITESFQVKRQVLLSASEAAE+ILRVDDI+KAAPR+R PD 
                            MAELGITESFQVKRQVLLSASEAAEVILRVDDIIKAAPRKRVPD 532
                        
                
                    gi|60393040|gb|AAX19463.1| TCP1-beta [Notothenia coriiceps]  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M +LGITESFQVKRQVLLSASEAAEMILRVD+I+KAAPR+R PD 
                            MAELGITESFQVKRQVLLSASEAAEMILRVDNIIKAAPRKRVPD 533
                        
                
                    gi|114051313|ref|NP_001040109.1| chaperonin containing t-complex polypeptide 1 beta subunit [...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPDMR 445
                            M+KLG+TES+ VKRQVLLSA+EAAEMILRVD+I+KAAPR+R PD R 
                            MKKLGVTESYVVKRQVLLSAAEAAEMILRVDNILKAAPRRRGPDRR 535
                        
                
                    gi|260797797|ref|XP_002593888.1| hypothetical protein BRAFLDRAFT_279056 [Branchiostoma florid...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M++LGITES +VKR VLLSA+EAAEMILRVDD++KAAPRQR PD 
                            MQQLGITESLKVKRAVLLSAAEAAEMILRVDDVIKAAPRQRQPD 533
                        
                
                    gi|213511170|ref|NP_001133605.1| T-complex protein 1 subunit beta [Salmo salar] >gi|209154654...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M ++G+TESFQVKRQVLLSA+EAAEMILRVD+I+KAAPR+R PD 
                            MSEMGVTESFQVKRQVLLSAAEAAEMILRVDNIIKAAPRKRVPD 532
                        
                
                    gi|189518398|ref|XP_001918886.1| PREDICTED: hypothetical protein [Danio rerio]  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M  LG+TESFQVKRQVLLSA+EAAEMILRVD+I+KAAPR+R PD 
                            MSALGVTESFQVKRQVLLSAAEAAEMILRVDNIIKAAPRKRVPD 258
                        
                
                    gi|157423537|gb|AAI53469.1| Cct2 protein [Danio rerio]  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M  LG+TESFQVKRQVLLSA+EAAEMILRVD+I+KAAPR+R PD 
                            MSALGVTESFQVKRQVLLSAAEAAEMILRVDNIIKAAPRKRVPD 348
                        
                
                    gi|42627881|ref|NP_958863.1| chaperonin containing TCP1, subunit 2 (beta) [Danio rerio] >...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M  LG+TESFQVKRQVLLSA+EAAEMILRVD+I+KAAPR+R PD 
                            MSALGVTESFQVKRQVLLSAAEAAEMILRVDNIIKAAPRKRVPD 532
                        
                
                    gi|55741976|ref|NP_001006757.1| chaperonin containing TCP1, subunit 2 (beta) [Xenopus (Silur...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M +LGITESFQVKRQVLLSASEAAE+ILRVD+I+KAAPR+R PD 
                            MGELGITESFQVKRQVLLSASEAAEVILRVDNIIKAAPRKRVPD 532
                        
                
                    gi|156551988|ref|XP_001602878.1| PREDICTED: similar to ENSANGP00000004677 [Nasonia vitripenni...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M+KLGITES+ VKRQVLLSA+EAAEMILRVDDI+KAAPR+R PD 
                            MKKLGITESWVVKRQVLLSAAEAAEMILRVDDILKAAPRKRVPD 536
                        
                
                    gi|126339411|ref|XP_001369473.1| PREDICTED: similar to chaperonin containing t-complex polype...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M +LGITESFQVKRQVLLSA+EAAE+ILRVD+I+KAAPR+R PD 
                            MAELGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPD 678
                        
                
                    gi|170046898|ref|XP_001850982.1| thermosome subunit alpha [Culex quinquefasciatus] >gi|167869...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M++LGITESF VKRQVLLSASEAAEMILRVD+I+K APR+R PD 
                            MKELGITESFAVKRQVLLSASEAAEMILRVDNIIKCAPRKRVPD 297
                        
                
                    gi|149632291|ref|XP_001511892.1| PREDICTED: similar to Chaperonin containing TCP1, subunit 2 ...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M  LGITESFQVKRQVLLSA+EAAE+ILRVD+I+KAAPR+R PD 
                            MATLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPD 560
                        
                
                    gi|118429555|gb|ABK91825.1| chaperonin-containing TCP1 subunit 2 [Artemia franciscana]  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPDMR 445
                            ME LGITESF VKRQVL+SA EAAEMI+RVDDI+KAAPR+R  D R 
                            MESLGITESFMVKRQVLVSAHEAAEMIVRVDDIIKAAPRKREVDNR 103
                        
                
                    gi|77735435|ref|NP_001029411.1| chaperonin containing TCP1, subunit 2 (beta) [Bos taurus] >g...  
                        
                            MEKLGITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 449
                            M  LGITESFQVKRQVLLSA+EAAE+ILRVD+I+KAAPR+R PD 
                            MSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPD 532
                        
                
                    gi|67772093|gb|AAY79299.1| chaperonin subunit 2 [Siniperca chuatsi]  
                        
                            GITESFQVKRQVLLSASEAAEMILRVDDIVKAAPRQRNPD 445
                            GITESFQVKRQVLLSASEAAEMILRVD+I+KAAPR+R PD 
                            GITESFQVKRQVLLSASEAAEMILRVDNIIKAAPRKRVPD 42